Cre04.g214750.t1.1 vesicle-associated membrane protein 713

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g214750.t1.1 chromosome_4 vesicle-associated membrane protein 713 CDS 1291400 1294144 - 2 744

Phytozome

Locus Genomic View Functional Annotation
Cre04.g214750.t1.1 Cre04.g214750.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
VMP7, VMPL2 g4677.t1 Not available 30791069 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0164
motif_0164_1

motif_0164_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0012
Motif Bicluster: 
bicluster_0164
Width: 
20
Number of Sites: 
1
Consensus: 
aTAAatATGnaatTcAttAA
motif_0164_2

motif_0164_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0164
Width: 
24
Number of Sites: 
1
Consensus: 
AgttctcTcTTtTcATctngaTta
 0.14
bicluster_0200
motif_0200_1

motif_0200_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.061
Motif Bicluster: 
bicluster_0200
Width: 
24
Number of Sites: 
1
Consensus: 
TttnnatAnaAcAtttngataCAt
motif_0200_2

motif_0200_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0200
Width: 
21
Number of Sites: 
1
Consensus: 
TCAaCatgAnnAtAGgAAACT
 0.29

GO Terms

GO:0016192 GO:0016021 -

vesicle-mediated transport

GO Category: 
biological_process
Details: 
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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