Cre04.g217945.t2.1 fatty acid desaturase 5

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g217945.t2.1 chromosome_4 fatty acid desaturase 5 CDS 630503 635651 + 5 148

Phytozome

Locus Genomic View Functional Annotation
Cre04.g217945.t2.1 Cre04.g217945.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g4576.t2, Cre03.g209600.t2.1 Not available 30791404 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0043
motif_0043_1

motif_0043_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000005
Motif Bicluster: 
bicluster_0043
Width: 
24
Number of Sites: 
1
Consensus: 
AcaCAcaCAcacaCaCAcAtaaAc
motif_0043_2

motif_0043_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000026
Motif Bicluster: 
bicluster_0043
Width: 
20
Number of Sites: 
1
Consensus: 
GGAGgtGggGgAgGanGgGG
 0.19
bicluster_0113
motif_0113_1

motif_0113_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000016
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
GnTtaTGTTGtTGtT
motif_0113_2

motif_0113_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000001
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
cTGCTGcTaCTGCTG
 0.26

GO Terms

GO:0006629 -

lipid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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