Cre04.g225750.t2.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g225750.t2.1 chromosome_4 CDS 3102311 3111525 - 9 214

Phytozome

Locus Genomic View Functional Annotation
Cre04.g225750.t2.1 Cre04.g225750.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g4933.t1 JGI423203 30791117 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0091
motif_0091_1

motif_0091_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00054
Motif Bicluster: 
bicluster_0091
Width: 
20
Number of Sites: 
1
Consensus: 
CaCCgCCacCnCCaCcgCCa
motif_0091_2

motif_0091_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
42
Motif Bicluster: 
bicluster_0091
Width: 
21
Number of Sites: 
1
Consensus: 
ATgAAgTAAtaCAtAtACaGC
 0.25
bicluster_0200
motif_0200_1

motif_0200_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.061
Motif Bicluster: 
bicluster_0200
Width: 
24
Number of Sites: 
1
Consensus: 
TttnnatAnaAcAtttngataCAt
motif_0200_2

motif_0200_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0200
Width: 
21
Number of Sites: 
1
Consensus: 
TCAaCatgAnnAtAGgAAACT
 0.29

GO Terms

GO:0000287 GO:0016791 GO:0009117 -

magnesium ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.

phosphatase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.

nucleotide metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI423203

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