Cre05.g237450.t1.2 30S ribosomal protein, putative

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre05.g237450.t1.2 chromosome_5 30S ribosomal protein, putative CDS 2817337 2820699 - 3 362

Phytozome

Locus Genomic View Functional Annotation
Cre05.g237450.t1.2 Cre05.g237450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g5462.t1, Cre05.g237450.t1.1 JGI150956 30783054 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0112
motif_0112_1

motif_0112_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.6e-25
Motif Bicluster: 
bicluster_0112
Width: 
24
Number of Sites: 
1
Consensus: 
GCAGcgGCAGtgGCAGcnGCgGca
motif_0112_2

motif_0112_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000016
Motif Bicluster: 
bicluster_0112
Width: 
24
Number of Sites: 
1
Consensus: 
gTgcGTGcgTGTGTGTgTgtGTGt
 0.22
bicluster_0212
motif_0212_1

motif_0212_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
4.1e-35
Motif Bicluster: 
bicluster_0212
Width: 
21
Number of Sites: 
1
Consensus: 
CTGCcGCtGCTGCtGCtGctG
motif_0212_2

motif_0212_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
6.6e-30
Motif Bicluster: 
bicluster_0212
Width: 
21
Number of Sites: 
1
Consensus: 
gCCGCCgCCgCCgCCgCCgCC
 0.25

GO Terms

GO:0044238 -

primary metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI150956

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