Cre06.g251400.t1.2 NADP-malic enzyme 3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g251400.t1.2 chromosome_6 NADP-malic enzyme 3 CDS 328329 336894 - 8 565

Phytozome

Locus Genomic View Functional Annotation
Cre06.g251400.t1.2 Cre06.g251400.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g5630.t1, Cre06.g251400.t1.1 JGI126820 30779115 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0147
motif_0147_1

motif_0147_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-19
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
TGCgTgTgtGtgTGTgTgTGTgtG
motif_0147_2

motif_0147_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000042
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
GGtGGcGGtGGcGGtGGCGGtGGc
 0.18
bicluster_0171
motif_0171_1

motif_0171_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1500
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
CAnACTtgTAnTtcAaTnAAT
motif_0171_2

motif_0171_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
aGAgAAcAaaAtctAAgngAA
 0.17

GO Terms

GO:0004471 GO:0055114 GO:0051287 -

malate dehydrogenase (decarboxylating) activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+. Does not decarboxylate oxaloacetate.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

NAD binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI126820

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