Cre06.g272850.t1.2 Ribosomal protein L10 family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g272850.t1.2 chromosome_6 Ribosomal protein L10 family protein CDS 2941297 2943824 + 2 527

Phytozome

Locus Genomic View Functional Annotation
Cre06.g272850.t1.2 Cre06.g272850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g6122.t1, Cre06.g272850.t1.1 JGI126960 30779201 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0097
motif_0097_1

motif_0097_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0071
Motif Bicluster: 
bicluster_0097
Width: 
24
Number of Sites: 
1
Consensus: 
TGCTGCTncTGCnGCaGCtGCcGC
motif_0097_2

motif_0097_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.2
Motif Bicluster: 
bicluster_0097
Width: 
14
Number of Sites: 
1
Consensus: 
CAgATGgcATcCAT
 0.14
bicluster_0205
motif_0205_1

motif_0205_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
27
Motif Bicluster: 
bicluster_0205
Width: 
24
Number of Sites: 
1
Consensus: 
TtGtAgnTaccagaaCtAaCTaaa
motif_0205_2

motif_0205_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
110
Motif Bicluster: 
bicluster_0205
Width: 
21
Number of Sites: 
1
Consensus: 
TantTttcAtTnttaTGtcAT
 0.07

GO Terms

GO:0042254 GO:0005622 -

ribosome biogenesis

GO Category: 
biological_process
Details: 
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.

intracellular

GO Category: 
cellular_component
Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI126960

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