Cre06.g275500.t1.2 Integrase-type DNA-binding superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g275500.t1.2 chromosome_6 Integrase-type DNA-binding superfamily protein CDS 3163970 3169185 - 5 215

Phytozome

Locus Genomic View Functional Annotation
Cre06.g275500.t1.2 Cre06.g275500.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g6177.t1, Cre06.g275500.t1.1 Not available 30779983 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0153
motif_0153_1

motif_0153_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000012
Motif Bicluster: 
bicluster_0153
Width: 
15
Number of Sites: 
1
Consensus: 
ACaCaCAnACACaCA
motif_0153_2

motif_0153_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
150
Motif Bicluster: 
bicluster_0153
Width: 
24
Number of Sites: 
1
Consensus: 
AACAAAGaaTcacctcagaCAtcA
 0.19
bicluster_0199
motif_0199_1

motif_0199_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000031
Motif Bicluster: 
bicluster_0199
Width: 
21
Number of Sites: 
1
Consensus: 
GgCGatGGcGGcGGCgGcaGC
motif_0199_2

motif_0199_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.04
Motif Bicluster: 
bicluster_0199
Width: 
15
Number of Sites: 
1
Consensus: 
cGCagcTGCTgnTGC
 0.19

GO Terms

GO:0003700 GO:0006355 -

sequence-specific DNA binding transcription factor activity

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

regulation of transcription, DNA-dependent

GO Category: 
biological_process
Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-dependent transcription.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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