Cre06.g278111.t1.1 potassium transport 2/3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g278111.t1.1 chromosome_6 potassium transport 2/3 CDS 3537457 3545812 - 8 355

Phytozome

Locus Genomic View Functional Annotation
Cre06.g278111.t1.1 Cre06.g278111.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g6254.t1, Cre13.g594050.t1.1, Cre13.g594050.t1.2 Not available 30779218 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0086
motif_0086_1

motif_0086_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29000
Motif Bicluster: 
bicluster_0086
Width: 
15
Number of Sites: 
1
Consensus: 
aAGnaGCAGcGgCAG
motif_0086_2

motif_0086_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.38
Motif Bicluster: 
bicluster_0086
Width: 
15
Number of Sites: 
1
Consensus: 
TGTTtctGTtggTGt
 0.18
bicluster_0107
motif_0107_1

motif_0107_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000028
Motif Bicluster: 
bicluster_0107
Width: 
21
Number of Sites: 
1
Consensus: 
CgGCAgCaGCAGCGGCgGCgG
motif_0107_2

motif_0107_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00002
Motif Bicluster: 
bicluster_0107
Width: 
10
Number of Sites: 
1
Consensus: 
TTGTGTTTgt
 0.26

GO Terms

GO:0005216 GO:0006811 GO:0055085 GO:0016020 -

ion channel activity

GO Category: 
molecular_function
Details: 
Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

ion transport

GO Category: 
biological_process
Details: 
The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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