Cre06.g278239.t2.1 SERINE-ARGININE PROTEIN 30

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g278239.t2.1 chromosome_6 SERINE-ARGININE PROTEIN 30 CDS 4222107 4225405 - 3 298

Phytozome

Locus Genomic View Functional Annotation
Cre06.g278239.t2.1 Cre06.g278239.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g6381.t1, Cre13.g600300.t2.1 Not available 30779802 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0091
motif_0091_1

motif_0091_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00054
Motif Bicluster: 
bicluster_0091
Width: 
20
Number of Sites: 
1
Consensus: 
CaCCgCCacCnCCaCcgCCa
motif_0091_2

motif_0091_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
42
Motif Bicluster: 
bicluster_0091
Width: 
21
Number of Sites: 
1
Consensus: 
ATgAAgTAAtaCAtAtACaGC
 0.25
bicluster_0166
motif_0166_1

motif_0166_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000025
Motif Bicluster: 
bicluster_0166
Width: 
11
Number of Sites: 
1
Consensus: 
TGtGTGCaTGt
motif_0166_2

motif_0166_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.58
Motif Bicluster: 
bicluster_0166
Width: 
23
Number of Sites: 
1
Consensus: 
tttAntTTGgcCTGgTATtTaCA
 0.32

GO Terms

GO:0003676 GO:0019013 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

viral nucleocapsid

GO Category: 
cellular_component
Details: 
The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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