Cre06.g282000.t2.1 starch synthase 3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g282000.t2.1 chromosome_6 starch synthase 3 CDS 5212616 5224459 + 11 843

Phytozome

Locus Genomic View Functional Annotation
Cre06.g282000.t2.1 Cre06.g282000.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SSS3 g6559.t2 JGI191662 30779863 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0006
motif_0006_1

motif_0006_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000074
Motif Bicluster: 
bicluster_0006
Width: 
21
Number of Sites: 
1
Consensus: 
aGGCGGcGGcgGcgGCGGcgg
motif_0006_2

motif_0006_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
95
Motif Bicluster: 
bicluster_0006
Width: 
8
Number of Sites: 
1
Consensus: 
AAaaTGTT
 0.19
bicluster_0063
motif_0063_1

motif_0063_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6e-22
Motif Bicluster: 
bicluster_0063
Width: 
24
Number of Sites: 
1
Consensus: 
CtGCcGCcgCtGCtaCTGCtGccg
motif_0063_2

motif_0063_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000002
Motif Bicluster: 
bicluster_0063
Width: 
21
Number of Sites: 
1
Consensus: 
CGcaGCCGCTGCaGCTGgcGC
 0.22

GO Terms

GO:0009058 GO:2001070 -

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

starch binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with starch.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI191662

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