Cre06.g294200.t1.1

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g294200.t1.1 chromosome_6 CDS 6669202 6676160 - 6 958
Locus Genomic View Functional Annotation
Cre06.g294200.t1.1 Cre06.g294200.t1.1

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g6811.t1 JGI153895 30779211 Search
Motif 1 Motif 2 Residual
bicluster_0073

motif_0073_1

e.value: 
42
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
tatgTtcTaTTaCTtTncatT

motif_0073_2

e.value: 
1.4
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
gCtGcTGCcgCtGCTGcCGCC
0.14
bicluster_0150

motif_0150_1

e.value: 
0.29
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
gCATgcanACaTGCA

motif_0150_2

e.value: 
44
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
tTttAttgTgTcTgT
0.11
GO:0003911 GO:0006260 GO:0006281 -

DNA ligase (NAD+) activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).

DNA replication

GO Category: 
biological_process
Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.

DNA repair

GO Category: 
biological_process
Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI153895
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