Cre06.g297400.t1.1 Oxidoreductase, zinc-binding dehydrogenase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g297400.t1.1 chromosome_6 Oxidoreductase, zinc-binding dehydrogenase family protein CDS 7133691 7137005 - 3 314

Phytozome

Locus Genomic View Functional Annotation
Cre06.g297400.t1.1 Cre06.g297400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g6879.t1 Not available 30778611 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0019
motif_0019_1

motif_0019_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.029
Motif Bicluster: 
bicluster_0019
Width: 
21
Number of Sites: 
1
Consensus: 
tttgcAAAtgCTtatAtgnnt
motif_0019_2

motif_0019_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7e-35
Motif Bicluster: 
bicluster_0019
Width: 
21
Number of Sites: 
1
Consensus: 
TGcTggtGCTGnTgCtGCTGc
 0.27
bicluster_0025
motif_0025_1

motif_0025_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000013
Motif Bicluster: 
bicluster_0025
Width: 
24
Number of Sites: 
1
Consensus: 
tAgcnaCAgcAgCAacagcAgcAa
motif_0025_2

motif_0025_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.9e-21
Motif Bicluster: 
bicluster_0025
Width: 
21
Number of Sites: 
1
Consensus: 
GGCGGcGGtGGCaGCGGCnGC
 0.28

GO Terms

GO:0008270 GO:0016491 GO:0055114 -

zinc ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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