Cre06.g302700.t1.1 RNI-like superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g302700.t1.1 chromosome_6 RNI-like superfamily protein CDS 7815997 7822578 + 6 581

Phytozome

Locus Genomic View Functional Annotation
Cre06.g302700.t1.1 Cre06.g302700.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g7008.t1 JGI400743 30779879 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0017
motif_0017_1

motif_0017_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000036
Motif Bicluster: 
bicluster_0017
Width: 
24
Number of Sites: 
1
Consensus: 
CaCCGCCgCcnCcaCcgCCGCcnC
motif_0017_2

motif_0017_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
47
Motif Bicluster: 
bicluster_0017
Width: 
23
Number of Sites: 
1
Consensus: 
CtgttgctGcTGcTgctggTgnt
 0.19
bicluster_0212
motif_0212_1

motif_0212_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
4.1e-35
Motif Bicluster: 
bicluster_0212
Width: 
21
Number of Sites: 
1
Consensus: 
CTGCcGCtGCTGCtGCtGctG
motif_0212_2

motif_0212_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
6.6e-30
Motif Bicluster: 
bicluster_0212
Width: 
21
Number of Sites: 
1
Consensus: 
gCCGCCgCCgCCgCCgCCgCC
 0.25

GO Terms

GO:0005515 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI400743

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