Cre07.g313700.t1.1 glutamate tRNA synthetase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g313700.t1.1 chromosome_7 glutamate tRNA synthetase CDS 225128 231247 - 6 119

Phytozome

Locus Genomic View Functional Annotation
Cre07.g313700.t1.1 Cre07.g313700.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GTS2, TSE2 g7260.t1 JGI195574 30775172 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0070
motif_0070_1

motif_0070_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0070
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCagCacCgCCtCCaCCtccaC
motif_0070_2

motif_0070_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
76
Motif Bicluster: 
bicluster_0070
Width: 
15
Number of Sites: 
1
Consensus: 
cAAnTGaanAanAaA
 0.14
bicluster_0134
motif_0134_1

motif_0134_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
450000
Motif Bicluster: 
bicluster_0134
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA
motif_0134_2

motif_0134_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
660
Motif Bicluster: 
bicluster_0134
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
 0.11

GO Terms

GO:0005524 GO:0016876 GO:0043039 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ligase activity, forming aminoacyl-tRNA and related compounds

GO Category: 
molecular_function
Details: 
Catalysis of the joining of an amino acid and a nucleic acid (usually tRNA) or poly(ribitol phosphate), with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. The reaction forms an aminoacyl-tRNA or a related compound.

tRNA aminoacylation

GO Category: 
biological_process
Details: 
The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195574

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