Cre07.g330250.t1.2 photosystem I subunit H-1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g330250.t1.2 chromosome_7 photosystem I subunit H-1 CDS 2613753 2615562 + 1 809

Phytozome

Locus Genomic View Functional Annotation
Cre07.g330250.t1.2 Cre07.g330250.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g7685.t1, Cre07.g330250.t1.1 JGI182959 30775443 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0057
motif_0057_1

motif_0057_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000052
Motif Bicluster: 
bicluster_0057
Width: 
24
Number of Sites: 
1
Consensus: 
ATAGgTCAGCAAaTGGaTGAACAT
motif_0057_2

motif_0057_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0058
Motif Bicluster: 
bicluster_0057
Width: 
21
Number of Sites: 
1
Consensus: 
GgcaGGGGnGggGcGgGGcGG
 0.05
bicluster_0186
motif_0186_1

motif_0186_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.45
Motif Bicluster: 
bicluster_0186
Width: 
15
Number of Sites: 
1
Consensus: 
TCTGCCagTTTncTT
motif_0186_2

motif_0186_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
34
Motif Bicluster: 
bicluster_0186
Width: 
20
Number of Sites: 
1
Consensus: 
AAAACTAAAAcTACcTGCAT
 0.05

GO Terms

GO:0015979 GO:0009522 GO:0009538 -

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem I

GO Category: 
cellular_component
Details: 
A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).

photosystem I reaction center

GO Category: 
cellular_component
Details: 
A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI182959

Add comment

Log in to post comments