Cre07.g341850.t1.2 Translation initiation factor 2, small GTP-binding protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g341850.t1.2 chromosome_7 Translation initiation factor 2, small GTP-binding protein CDS 4249900 4260716 + 10 816

Phytozome

Locus Genomic View Functional Annotation
Cre07.g341850.t1.2 Cre07.g341850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
EIF2, INFB g7951.t1, Cre07.g341850.t1.1 JGI116089 30775289 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18
bicluster_0167
motif_0167_1

motif_0167_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000042
Motif Bicluster: 
bicluster_0167
Width: 
15
Number of Sites: 
1
Consensus: 
CAGCAgCgcCGnCAG
motif_0167_2

motif_0167_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00021
Motif Bicluster: 
bicluster_0167
Width: 
21
Number of Sites: 
1
Consensus: 
GCAGcAGcaGgAGcngcaccG
 0.21

GO Terms

GO:0003924 GO:0005525 GO:0003743 GO:0006413 -

GTPase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.

GTP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.

translation initiation factor activity

GO Category: 
molecular_function
Details: 
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.

translational initiation

GO Category: 
biological_process
Details: 
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI116089

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