Cre07.g342150.t1.2 Glutamyl-tRNA reductase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g342150.t1.2 chromosome_7 Glutamyl-tRNA reductase family protein CDS 4202521 4206092 + 3 571

Phytozome

Locus Genomic View Functional Annotation
Cre07.g342150.t1.2 Cre07.g342150.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HEM1, HEMA g7943.t1, Cre07.g342150.t1.1 JGI183460 30774890 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0170
motif_0170_1

motif_0170_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
14
Motif Bicluster: 
bicluster_0170
Width: 
15
Number of Sites: 
1
Consensus: 
ACAcACaTGCAcACA
motif_0170_2

motif_0170_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
83
Motif Bicluster: 
bicluster_0170
Width: 
23
Number of Sites: 
1
Consensus: 
GCTgCcgnTGCtAcTGCngaTGC
 0.15
bicluster_0172
motif_0172_1

motif_0172_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.3
Motif Bicluster: 
bicluster_0172
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa
motif_0172_2

motif_0172_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
94000
Motif Bicluster: 
bicluster_0172
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
 0.14

GO Terms

GO:0008883 GO:0050661 GO:0033014 GO:0055114 -

glutamyl-tRNA reductase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: (S)-4-amino-5-oxopentanoate + NADP(+) + tRNA(Glu) = L-glutamyl-tRNA(Glu) + H(+) + NADPH.

NADP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.

tetrapyrrole biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI183460

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