Cre08.g378850.t1.2 Phosphoribosyltransferase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre08.g378850.t1.2 chromosome_8 Phosphoribosyltransferase family protein CDS 3971164 3977103 - 5 939

Phytozome

Locus Genomic View Functional Annotation
Cre08.g378850.t1.2 Cre08.g378850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RPPK1 g8917.t1, Cre08.g378850.t1.1 JGI137493 30773952 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0131
motif_0131_1

motif_0131_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3600
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
taTtTAtATtACaAt
motif_0131_2

motif_0131_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
ACATTgcAaTgCtTA
 0.12
bicluster_0140
motif_0140_1

motif_0140_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
25
Motif Bicluster: 
bicluster_0140
Width: 
21
Number of Sites: 
1
Consensus: 
AataaCcaAnttTAtTGTaaT
motif_0140_2

motif_0140_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
15
Motif Bicluster: 
bicluster_0140
Width: 
15
Number of Sites: 
1
Consensus: 
tTGGTgTGctTgTTg
 0.11

GO Terms

GO:0009116 -

nucleoside metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI137493

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