Cre09.g391450.t1.2 Hybrid-cluster protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g391450.t1.2 chromosome_9 Hybrid-cluster protein CDS 2433372 2436978 + 3 606

Phytozome

Locus Genomic View Functional Annotation
Cre09.g391450.t1.2 Cre09.g391450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HCP1 g9463.t1, Cre09.g391450.t1.1 JGI148253 30781016 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0015
motif_0015_1

motif_0015_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.02
Motif Bicluster: 
bicluster_0015
Width: 
20
Number of Sites: 
1
Consensus: 
GGCGGcGgCGgTGGCgGCGG
motif_0015_2

motif_0015_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
9.7
Motif Bicluster: 
bicluster_0015
Width: 
21
Number of Sites: 
1
Consensus: 
AaTAgtATcTaaAcatAtATa
 0.05
bicluster_0031
motif_0031_1

motif_0031_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.9e-16
Motif Bicluster: 
bicluster_0031
Width: 
24
Number of Sites: 
1
Consensus: 
CTCCgcCTcCtcCTcccCcTcCTc
motif_0031_2

motif_0031_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000012
Motif Bicluster: 
bicluster_0031
Width: 
24
Number of Sites: 
1
Consensus: 
GcTGcTGctGgnGnnGctGtCGcg
 0.14

GO Terms

GO:0016491 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI148253

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