Cre09.g393250.t1.1 Sodium Bile acid symporter family

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g393250.t1.1 chromosome_9 Sodium Bile acid symporter family CDS 2159560 2164085 - 4 525

Phytozome

Locus Genomic View Functional Annotation
Cre09.g393250.t1.1 Cre09.g393250.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g9424.t1 JGI297770 30780809 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0086
motif_0086_1

motif_0086_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29000
Motif Bicluster: 
bicluster_0086
Width: 
15
Number of Sites: 
1
Consensus: 
aAGnaGCAGcGgCAG
motif_0086_2

motif_0086_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.38
Motif Bicluster: 
bicluster_0086
Width: 
15
Number of Sites: 
1
Consensus: 
TGTTtctGTtggTGt
 0.18
bicluster_0096
motif_0096_1

motif_0096_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00013
Motif Bicluster: 
bicluster_0096
Width: 
21
Number of Sites: 
1
Consensus: 
GAGGCGGaGgcGGaGGcGGAG
motif_0096_2

motif_0096_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.1
Motif Bicluster: 
bicluster_0096
Width: 
24
Number of Sites: 
1
Consensus: 
AtAGAAatgAAAGCgAGTGtGaAT
 0.21

GO Terms

GO:0008508 GO:0006814 GO:0016020 -

bile acid:sodium symporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).

sodium ion transport

GO Category: 
biological_process
Details: 
The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI297770

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