Cre09.g400750.t1.2 ammonium transporter 1;5

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g400750.t1.2 chromosome_9 ammonium transporter 1;5 CDS 1040456 1049705 + 9 249

Phytozome

Locus Genomic View Functional Annotation
Cre09.g400750.t1.2 Cre09.g400750.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AMT5 g9253.t1, Cre09.g400750.t1.1 JGI206118 30780710 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0119
motif_0119_1

motif_0119_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0119
Width: 
24
Number of Sites: 
1
Consensus: 
TTTAgTTTGGGCTGGTATtTaCAA
motif_0119_2

motif_0119_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.91
Motif Bicluster: 
bicluster_0119
Width: 
18
Number of Sites: 
1
Consensus: 
TgCcgTTGcAaactGTnt
 0.20
bicluster_0187
motif_0187_1

motif_0187_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0187
Width: 
24
Number of Sites: 
1
Consensus: 
AccCTatGGGACttcgCcAAcCTG
motif_0187_2

motif_0187_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
90
Motif Bicluster: 
bicluster_0187
Width: 
23
Number of Sites: 
1
Consensus: 
TtAatcCtgTCccAtnTcACatC
 0.16

GO Terms

GO:0008519 GO:0015696 GO:0016020 -

ammonium transmembrane transporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

ammonium transport

GO Category: 
biological_process
Details: 
The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI206118

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