Cre09.g402738.t1.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g402738.t1.1 chromosome_9 CDS 5940818 5945251 + 4 433

Phytozome

Locus Genomic View Functional Annotation
Cre09.g402738.t1.1 Cre09.g402738.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10026.t1, Cre02.g140650.t1.1 Not available 30781185 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0162
motif_0162_1

motif_0162_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000013
Motif Bicluster: 
bicluster_0162
Width: 
15
Number of Sites: 
1
Consensus: 
CnGCGGCGGcGGCaG
motif_0162_2

motif_0162_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0162
Width: 
0
Number of Sites: 
1
 0.26
bicluster_0197
motif_0197_1

motif_0197_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000015
Motif Bicluster: 
bicluster_0197
Width: 
21
Number of Sites: 
1
Consensus: 
aacatAcAATataagAAanaa
motif_0197_2

motif_0197_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.32
Motif Bicluster: 
bicluster_0197
Width: 
15
Number of Sites: 
1
Consensus: 
GttgTTGntggCATG
 0.23

GO Terms

GO:0016849 GO:0009190 GO:0035556 -

phosphorus-oxygen lyase activity

GO Category: 
molecular_function
Details: 
Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.

cyclic nucleotide biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.

intracellular signal transduction

GO Category: 
biological_process
Details: 
The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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