Cre09.g403500.t1.2 XB3 ortholog 1 in Arabidopsis thaliana

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g403500.t1.2 chromosome_9 XB3 ortholog 1 in Arabidopsis thaliana CDS 612134 618205 + 6 071

Phytozome

Locus Genomic View Functional Annotation
Cre09.g403500.t1.2 Cre09.g403500.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g9192.t1, Cre09.g403500.t1.1 Not available 30780393 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0010
motif_0010_1

motif_0010_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000071
Motif Bicluster: 
bicluster_0010
Width: 
24
Number of Sites: 
1
Consensus: 
CCgCCaCCGCCnCCGCCgCcgCCt
motif_0010_2

motif_0010_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00027
Motif Bicluster: 
bicluster_0010
Width: 
23
Number of Sites: 
1
Consensus: 
tCaGctGCTGCTGcaGtTGCTgt
 0.23
bicluster_0040
motif_0040_1

motif_0040_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000073
Motif Bicluster: 
bicluster_0040
Width: 
24
Number of Sites: 
1
Consensus: 
aCaGcaaCAgcaGCAgcgGCAGca
motif_0040_2

motif_0040_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.77
Motif Bicluster: 
bicluster_0040
Width: 
23
Number of Sites: 
1
Consensus: 
GTTTgCTGaTGCgCATTcCtCAt
 0.25

GO Terms

GO:0005515 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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