Cre09.g410100.t1.2 ER-type Ca2+-ATPase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g410100.t1.2 chromosome_9 ER-type Ca2+-ATPase 1 CDS 6876445 6885326 + 8 881

Phytozome

Locus Genomic View Functional Annotation
Cre09.g410100.t1.2 Cre09.g410100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10161.t1, Cre09.g410100.t1.1 JGI104709 30780876 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0100
motif_0100_1

motif_0100_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1
Motif Bicluster: 
bicluster_0100
Width: 
19
Number of Sites: 
1
Consensus: 
AaAtGCTgcATTGCtAAtA
motif_0100_2

motif_0100_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.4
Motif Bicluster: 
bicluster_0100
Width: 
24
Number of Sites: 
1
Consensus: 
GGCaGTGgcGGcGGcTGcGGCtGC
 0.13
bicluster_0116
motif_0116_1

motif_0116_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000082
Motif Bicluster: 
bicluster_0116
Width: 
20
Number of Sites: 
1
Consensus: 
CAGCgnCAGCGGCagcgGCa
motif_0116_2

motif_0116_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0116
Width: 
15
Number of Sites: 
1
Consensus: 
TGgttGTGTgggTGT
 0.10

GO Terms

GO:0000166 GO:0046872 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI104709

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