Cre09.g410650.t1.2 ATP phosphoribosyl transferase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g410650.t1.2 chromosome_9 ATP phosphoribosyl transferase 2 CDS 6958405 6971138 + 12 733

Phytozome

Locus Genomic View Functional Annotation
Cre09.g410650.t1.2 Cre09.g410650.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HIS1 g10171.t1, Cre09.g410650.t1.1 JGI298133 30780550 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0125
motif_0125_1

motif_0125_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.012
Motif Bicluster: 
bicluster_0125
Width: 
15
Number of Sites: 
1
Consensus: 
TaAAGgAGgnCAAGg
motif_0125_2

motif_0125_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
380
Motif Bicluster: 
bicluster_0125
Width: 
23
Number of Sites: 
1
Consensus: 
GCCAaTatatgAtActcAanATC
 0.16
bicluster_0163
motif_0163_1

motif_0163_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.6
Motif Bicluster: 
bicluster_0163
Width: 
20
Number of Sites: 
1
Consensus: 
TtTnccATCCATtcnTgCAA
motif_0163_2

motif_0163_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
590
Motif Bicluster: 
bicluster_0163
Width: 
23
Number of Sites: 
1
Consensus: 
CcGCCGCCAcCgCCGtCGCCAcC
 0.17

GO Terms

GO:0003879 GO:0000105 GO:0005737 GO:0009058 GO:0000287 -

ATP phosphoribosyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + diphosphate = ATP + 5-phospho-alpha-D-ribose 1-diphosphate.

histidine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

magnesium ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI298133

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