Cre09.g416050.t1.2 arginosuccinate synthase family

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g416050.t1.2 chromosome_9 arginosuccinate synthase family CDS 7731381 7735817 + 4 436

Phytozome

Locus Genomic View Functional Annotation
Cre09.g416050.t1.2 Cre09.g416050.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AGS1 g10298.t1, Cre09.g416050.t1.1 JGI58140 30780467 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0155
motif_0155_1

motif_0155_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000065
Motif Bicluster: 
bicluster_0155
Width: 
15
Number of Sites: 
1
Consensus: 
cCACaCAcgCaCaCA
motif_0155_2

motif_0155_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.024
Motif Bicluster: 
bicluster_0155
Width: 
21
Number of Sites: 
1
Consensus: 
GCCgcCaCCGCCtCCACCgCc
 0.25
bicluster_0198
motif_0198_1

motif_0198_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0008
Motif Bicluster: 
bicluster_0198
Width: 
24
Number of Sites: 
1
Consensus: 
gcgGCAgcaGccgcgGCaGtgGCg
motif_0198_2

motif_0198_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.5
Motif Bicluster: 
bicluster_0198
Width: 
21
Number of Sites: 
1
Consensus: 
cCagCCcCgCCGCCgCCgCCg
 0.31

GO Terms

GO:0004055 GO:0005524 GO:0006526 -

argininosuccinate synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

arginine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI58140

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