Cre09.g417400.t2.1 origin of replication complex 1B

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g417400.t2.1 chromosome_9 origin of replication complex 1B CDS 7940555 7947595 - 7 040

Phytozome

Locus Genomic View Functional Annotation
Cre09.g417400.t2.1 Cre09.g417400.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10332.t2 Not available 30780602 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0082
motif_0082_1

motif_0082_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000043
Motif Bicluster: 
bicluster_0082
Width: 
19
Number of Sites: 
1
Consensus: 
CgTgATAAcgTgtAcaTaT
motif_0082_2

motif_0082_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
63
Motif Bicluster: 
bicluster_0082
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACAaGCagAactAGgGGcCAc
 0.23
bicluster_0151
motif_0151_1

motif_0151_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
35
Motif Bicluster: 
bicluster_0151
Width: 
15
Number of Sites: 
1
Consensus: 
atTAacTaactaTTT
motif_0151_2

motif_0151_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
510
Motif Bicluster: 
bicluster_0151
Width: 
11
Number of Sites: 
1
Consensus: 
CatAtAtATAG
 0.10

GO Terms

GO:0005515 GO:0003678 GO:0000723 GO:0006281 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

DNA helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix.

telomere maintenance

GO Category: 
biological_process
Details: 
Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences.

DNA repair

GO Category: 
biological_process
Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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