Cre10.g419550.t1.2 RNA ligase/cyclic nucleotide phosphodiesterase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g419550.t1.2 chromosome_10 RNA ligase/cyclic nucleotide phosphodiesterase family protein CDS 263342 266453 - 3 111

Phytozome

Locus Genomic View Functional Annotation
Cre10.g419550.t1.2 Cre10.g419550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10385.t1, Cre10.g419550.t1.1 Not available 30790826 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0155
motif_0155_1

motif_0155_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000065
Motif Bicluster: 
bicluster_0155
Width: 
15
Number of Sites: 
1
Consensus: 
cCACaCAcgCaCaCA
motif_0155_2

motif_0155_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.024
Motif Bicluster: 
bicluster_0155
Width: 
21
Number of Sites: 
1
Consensus: 
GCCgcCaCCGCCtCCACCgCc
 0.25
bicluster_0166
motif_0166_1

motif_0166_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000025
Motif Bicluster: 
bicluster_0166
Width: 
11
Number of Sites: 
1
Consensus: 
TGtGTGCaTGt
motif_0166_2

motif_0166_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.58
Motif Bicluster: 
bicluster_0166
Width: 
23
Number of Sites: 
1
Consensus: 
tttAntTTGgcCTGgTATtTaCA
 0.32

GO Terms

GO:0004112 -

cyclic-nucleotide phosphodiesterase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: a nucleoside cyclic phosphate + H2O = a nucleoside phosphate.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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