Cre10.g420550.t1.1 Peptidase S41 family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g420550.t1.1 chromosome_10 Peptidase S41 family protein CDS 387023 393004 + 5 981

Phytozome

Locus Genomic View Functional Annotation
Cre10.g420550.t1.1 Cre10.g420550.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TSP4 g10407.t1 JGI96534 30790857 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0021
motif_0021_1

motif_0021_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.7
Motif Bicluster: 
bicluster_0021
Width: 
15
Number of Sites: 
1
Consensus: 
AACAtgaTattcaGA
motif_0021_2

motif_0021_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
460
Motif Bicluster: 
bicluster_0021
Width: 
23
Number of Sites: 
1
Consensus: 
gCaGCGGCgGCAacggCAgCggC
 0.24
bicluster_0120
motif_0120_1

motif_0120_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.3
Motif Bicluster: 
bicluster_0120
Width: 
21
Number of Sites: 
1
Consensus: 
tTAaTaaaTnataAgagatTa
motif_0120_2

motif_0120_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.7
Motif Bicluster: 
bicluster_0120
Width: 
14
Number of Sites: 
1
Consensus: 
AaaAGcaCAAGnaA
 0.17

GO Terms

GO:0005515 GO:0008236 GO:0006508 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

serine-type peptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI96534

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