Cre10.g421600.t1.2 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g421600.t1.2 chromosome_10 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative CDS 572582 581433 + 8 851
Locus Genomic View Functional Annotation
Cre10.g421600.t1.2 Cre10.g421600.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TST2 g10433.t1, Cre10.g421600.t1.1 JGI281476 30790345 Search
Motif 1 Motif 2 Residual
bicluster_0023

motif_0023_1

e.value: 
0.00000000034
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
gAGCTgcgGaAGgAGCAGcAG

motif_0023_2

e.value: 
0.000021
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
TaTcTTaAtgtcTccaGAnantAA
0.10
bicluster_0097

motif_0097_1

e.value: 
0.0071
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
TGCTGCTncTGCnGCaGCtGCcGC

motif_0097_2

e.value: 
0.2
Motif Bicluster: 
Width: 
14
Number of Sites: 
1
Consensus: 
CAgATGgcATcCAT
0.14
GO:0000166 GO:0004812 GO:0005524 GO:0006418 GO:0016876 GO:0043039 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

aminoacyl-tRNA ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

tRNA aminoacylation for protein translation

GO Category: 
biological_process
Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

ligase activity, forming aminoacyl-tRNA and related compounds

GO Category: 
molecular_function
Details: 
Catalysis of the joining of an amino acid and a nucleic acid (usually tRNA) or poly(ribitol phosphate), with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. The reaction forms an aminoacyl-tRNA or a related compound.

tRNA aminoacylation

GO Category: 
biological_process
Details: 
The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI281476
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