Cre10.g423550.t1.1 threonine aldolase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g423550.t1.1 chromosome_10 threonine aldolase 2 CDS 830261 835431 + 5 170

Phytozome

Locus Genomic View Functional Annotation
Cre10.g423550.t1.1 Cre10.g423550.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ATA2 g10476.t1 JGI141056 30790108 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0006
motif_0006_1

motif_0006_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000074
Motif Bicluster: 
bicluster_0006
Width: 
21
Number of Sites: 
1
Consensus: 
aGGCGGcGGcgGcgGCGGcgg
motif_0006_2

motif_0006_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
95
Motif Bicluster: 
bicluster_0006
Width: 
8
Number of Sites: 
1
Consensus: 
AAaaTGTT
 0.19
bicluster_0031
motif_0031_1

motif_0031_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.9e-16
Motif Bicluster: 
bicluster_0031
Width: 
24
Number of Sites: 
1
Consensus: 
CTCCgcCTcCtcCTcccCcTcCTc
motif_0031_2

motif_0031_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000012
Motif Bicluster: 
bicluster_0031
Width: 
24
Number of Sites: 
1
Consensus: 
GcTGcTGctGgnGnnGctGtCGcg
 0.14

GO Terms

GO:0016829 GO:0006520 -

lyase activity

GO Category: 
molecular_function
Details: 
Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

cellular amino acid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI141056

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