Cre10.g430450.t1.2 formyltetrahydrofolate deformylase, putative

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g430450.t1.2 chromosome_10 formyltetrahydrofolate deformylase, putative CDS 1712056 1716907 - 4 851

Phytozome

Locus Genomic View Functional Annotation
Cre10.g430450.t1.2 Cre10.g430450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10630.t1, Cre10.g430450.t1.1 JGI421317 30790776 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0061
motif_0061_1

motif_0061_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
13
Motif Bicluster: 
bicluster_0061
Width: 
21
Number of Sites: 
1
Consensus: 
AnnCATTTTcTtAaAagacaa
motif_0061_2

motif_0061_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
550
Motif Bicluster: 
bicluster_0061
Width: 
23
Number of Sites: 
1
Consensus: 
AaTAtnaTAatgTntgTGtatTt
 0.13
bicluster_0108
motif_0108_1

motif_0108_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000068
Motif Bicluster: 
bicluster_0108
Width: 
23
Number of Sites: 
1
Consensus: 
CTGCtGCcgcTGCTgCTGCtgCa
motif_0108_2

motif_0108_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.02
Motif Bicluster: 
bicluster_0108
Width: 
15
Number of Sites: 
1
Consensus: 
GCCAgCacCAGCAGC
 0.12

GO Terms

GO:0016742 GO:0009058 GO:0016597 GO:0008152 -

hydroxymethyl-, formyl- and related transferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

amino acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI421317

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