Cre11.g478850.t1.2 Plastid-lipid associated protein PAP / fibrillin family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre11.g478850.t1.2 chromosome_11 Plastid-lipid associated protein PAP / fibrillin family protein CDS 3046366 3050039 + 3 673

Phytozome

Locus Genomic View Functional Annotation
Cre11.g478850.t1.2 Cre11.g478850.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g11887.t1, Cre11.g478850.t1.1 JGI393773 30775664 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0026
motif_0026_1

motif_0026_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
58
Motif Bicluster: 
bicluster_0026
Width: 
15
Number of Sites: 
1
Consensus: 
ATTaTaTnagTTAct
motif_0026_2

motif_0026_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000035
Motif Bicluster: 
bicluster_0026
Width: 
24
Number of Sites: 
1
Consensus: 
GcGgcaGcgGCAGCaGcagCaGCa
 0.22
bicluster_0159
motif_0159_1

motif_0159_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000017
Motif Bicluster: 
bicluster_0159
Width: 
15
Number of Sites: 
1
Consensus: 
aagtAtaaTAaAAtA
motif_0159_2

motif_0159_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1
Motif Bicluster: 
bicluster_0159
Width: 
24
Number of Sites: 
1
Consensus: 
GgCAgCgGCAGgagCAGCaGCAgC
 0.24

GO Terms

GO:0005198 GO:0009507 -

structural molecule activity

GO Category: 
molecular_function
Details: 
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.

chloroplast

GO Category: 
cellular_component
Details: 
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI393773

Add comment

Log in to post comments