Cre12.g488450.t1.1 Extracellular matrix protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g488450.t1.1 chromosome_12 Extracellular matrix protein CDS 1359264 1361787 - 2 523

Phytozome

Locus Genomic View Functional Annotation
Cre12.g488450.t1.1 Cre12.g488450.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
VSP3 g12216.t1 JGI195803 30791986 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0009
motif_0009_1

motif_0009_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.8
Motif Bicluster: 
bicluster_0009
Width: 
24
Number of Sites: 
1
Consensus: 
tGGaggcgGcGGcggtGgaGgcGG
motif_0009_2

motif_0009_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1300
Motif Bicluster: 
bicluster_0009
Width: 
8
Number of Sites: 
1
Consensus: 
AAATggAA
 0.33
bicluster_0025
motif_0025_1

motif_0025_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000013
Motif Bicluster: 
bicluster_0025
Width: 
24
Number of Sites: 
1
Consensus: 
tAgcnaCAgcAgCAacagcAgcAa
motif_0025_2

motif_0025_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.9e-21
Motif Bicluster: 
bicluster_0025
Width: 
21
Number of Sites: 
1
Consensus: 
GGCGGcGGtGGCaGCGGCnGC
 0.28

GO Terms

-

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195803

Add comment

Log in to post comments