Cre12.g490850.t1.1 ARM repeat superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g490850.t1.1 chromosome_12 ARM repeat superfamily protein CDS 1070736 1081665 + 10 929

Phytozome

Locus Genomic View Functional Annotation
Cre12.g490850.t1.1 Cre12.g490850.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12168.t1 Not available 30791907 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0106
motif_0106_1

motif_0106_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0013
Motif Bicluster: 
bicluster_0106
Width: 
24
Number of Sites: 
1
Consensus: 
TGcTGctGGcGcTGctGcTgnTgc
motif_0106_2

motif_0106_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.01
Motif Bicluster: 
bicluster_0106
Width: 
24
Number of Sites: 
1
Consensus: 
aATnAnttAcntcAaaatATnaac
 0.21
bicluster_0115
motif_0115_1

motif_0115_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0115
Width: 
24
Number of Sites: 
1
Consensus: 
ATaccaGnacAaacnAAaccAAAA
motif_0115_2

motif_0115_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.099
Motif Bicluster: 
bicluster_0115
Width: 
21
Number of Sites: 
1
Consensus: 
TcgctTTCcTtGTGcTCTcTA
 0.18

GO Terms

GO:0005515 GO:0008536 GO:0006886 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Ran GTPase binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.

intracellular protein transport

GO Category: 
biological_process
Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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