Cre12.g493400.t1.1 structural maintenance of chromosome 3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g493400.t1.1 chromosome_12 structural maintenance of chromosome 3 CDS 472572 482547 - 9 975

Phytozome

Locus Genomic View Functional Annotation
Cre12.g493400.t1.1 Cre12.g493400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12082.t1 JGI122088 30791789 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0141
motif_0141_1

motif_0141_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.001
Motif Bicluster: 
bicluster_0141
Width: 
15
Number of Sites: 
1
Consensus: 
CCgCCACCaCcaCCG
motif_0141_2

motif_0141_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.091
Motif Bicluster: 
bicluster_0141
Width: 
15
Number of Sites: 
1
Consensus: 
CAgCACcagCAgCAg
 0.18
bicluster_0158
motif_0158_1

motif_0158_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000011
Motif Bicluster: 
bicluster_0158
Width: 
21
Number of Sites: 
1
Consensus: 
GCAgtaGCagCAGCaaCAGCA
motif_0158_2

motif_0158_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.1
Motif Bicluster: 
bicluster_0158
Width: 
24
Number of Sites: 
1
Consensus: 
CaCCGcCtCCGCCtCCgCCTcCgC
 0.13

GO Terms

GO:0005515 GO:0005524 GO:0051276 GO:0005694 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

chromosome organization

GO Category: 
biological_process
Details: 
A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.

chromosome

GO Category: 
cellular_component
Details: 
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI122088

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