Cre12.g495850.t1.2 NAD(P)-binding Rossmann-fold superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g495850.t1.2 chromosome_12 NAD(P)-binding Rossmann-fold superfamily protein CDS 800235 804911 - 4 676

Phytozome

Locus Genomic View Functional Annotation
Cre12.g495850.t1.2 Cre12.g495850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HBD1 g12138.t1, Cre12.g495850.t1.1 JGI423846 30791782 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0017
motif_0017_1

motif_0017_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000036
Motif Bicluster: 
bicluster_0017
Width: 
24
Number of Sites: 
1
Consensus: 
CaCCGCCgCcnCcaCcgCCGCcnC
motif_0017_2

motif_0017_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
47
Motif Bicluster: 
bicluster_0017
Width: 
23
Number of Sites: 
1
Consensus: 
CtgttgctGcTGcTgctggTgnt
 0.19
bicluster_0047
motif_0047_1

motif_0047_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0015
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
tanattgTtaaAtTgaAgcnAAAg
motif_0047_2

motif_0047_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00019
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
AgcagCAGcAgCAgcAGCaggGgC
 0.18

GO Terms

GO:0016491 GO:0008152 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI423846

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