Cre12.g505850.t1.2 chaperonin 20

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g505850.t1.2 chromosome_12 chaperonin 20 CDS 2533877 2535922 - 2 045

Phytozome

Locus Genomic View Functional Annotation
Cre12.g505850.t1.2 Cre12.g505850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CPN23 g12450.t1, Cre12.g505850.t1.1 JGI188610 30793371 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0135
motif_0135_1

motif_0135_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
140
Motif Bicluster: 
bicluster_0135
Width: 
21
Number of Sites: 
1
Consensus: 
AaACaagAAAtGggCAAgaCa
motif_0135_2

motif_0135_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
390
Motif Bicluster: 
bicluster_0135
Width: 
11
Number of Sites: 
1
Consensus: 
AAtaTGCAGaC
 0.09
bicluster_0205
motif_0205_1

motif_0205_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
27
Motif Bicluster: 
bicluster_0205
Width: 
24
Number of Sites: 
1
Consensus: 
TtGtAgnTaccagaaCtAaCTaaa
motif_0205_2

motif_0205_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
110
Motif Bicluster: 
bicluster_0205
Width: 
21
Number of Sites: 
1
Consensus: 
TantTttcAtTnttaTGtcAT
 0.07

GO Terms

GO:0006457 GO:0005737 -

protein folding

GO Category: 
biological_process
Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI188610

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