Cre12.g509050.t1.1 PsbP-like protein 1

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g509050.t1.1 chromosome_12 PsbP-like protein 1 CDS 2117140 2119587 + 2 447
Locus Genomic View Functional Annotation
Cre12.g509050.t1.1 Cre12.g509050.t1.1

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12371.t1 Not available 30791680 Search
Motif 1 Motif 2 Residual
bicluster_0066

motif_0066_1

e.value: 
2300
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACATCAaaCnaGCgtTGaCcT

motif_0066_2

e.value: 
3200
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
gTAggTTtTGtaGcT
0.15
bicluster_0134

motif_0134_1

e.value: 
450000
Motif Bicluster: 
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA

motif_0134_2

e.value: 
660
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
0.11
GO:0005509 GO:0015979 GO:0009523 GO:0009654 GO:0019898 -

calcium ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem II

GO Category: 
cellular_component
Details: 
A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.

oxygen evolving complex

GO Category: 
cellular_component
Details: 
A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).

extrinsic to membrane

GO Category: 
cellular_component
Details: 
Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
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