Cre12.g509400.t1.2 ribonucleotide reductase 2A

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g509400.t1.2 chromosome_12 ribonucleotide reductase 2A CDS 2091189 2096175 - 4 986

Phytozome

Locus Genomic View Functional Annotation
Cre12.g509400.t1.2 Cre12.g509400.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RIR2B g12364.t1, Cre12.g509400.t1.1 JGI144621 30791837 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0010
motif_0010_1

motif_0010_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000071
Motif Bicluster: 
bicluster_0010
Width: 
24
Number of Sites: 
1
Consensus: 
CCgCCaCCGCCnCCGCCgCcgCCt
motif_0010_2

motif_0010_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00027
Motif Bicluster: 
bicluster_0010
Width: 
23
Number of Sites: 
1
Consensus: 
tCaGctGCTGCTGcaGtTGCTgt
 0.23
bicluster_0046
motif_0046_1

motif_0046_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000039
Motif Bicluster: 
bicluster_0046
Width: 
21
Number of Sites: 
1
Consensus: 
CAgCAGcGgCtGCAGCAGCnG
motif_0046_2

motif_0046_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.088
Motif Bicluster: 
bicluster_0046
Width: 
21
Number of Sites: 
1
Consensus: 
tGGTggtGGcGGcGGcgGcGG
 0.22

GO Terms

GO:0009186 GO:0055114 -

deoxyribonucleoside diphosphate metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI144621

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