Cre12.g515050.t1.1 SET domain protein 14

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g515050.t1.1 chromosome_12 SET domain protein 14 CDS 3752646 3767621 - 14 975

Phytozome

Locus Genomic View Functional Annotation
Cre12.g515050.t1.1 Cre12.g515050.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HLM18, SET4 g12708.t1 JGI21717 30791872 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0075
motif_0075_1

motif_0075_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.7e-16
Motif Bicluster: 
bicluster_0075
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC
motif_0075_2

motif_0075_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000095
Motif Bicluster: 
bicluster_0075
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
 0.23
bicluster_0110
motif_0110_1

motif_0110_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.5e-27
Motif Bicluster: 
bicluster_0110
Width: 
15
Number of Sites: 
1
Consensus: 
tGCTGCTGCtGCtGc
motif_0110_2

motif_0110_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0110
Width: 
24
Number of Sites: 
1
Consensus: 
CCacCGCCgCCGCCgctgcCgcCG
 0.25

GO Terms

GO:0005515 GO:0003677 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

DNA binding

GO Category: 
molecular_function
Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI21717

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