Cre12.g519000.t1.1 phosphoribosylanthranilate isomerase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g519000.t1.1 chromosome_12 phosphoribosylanthranilate isomerase 1 CDS 4232032 4234350 - 2 318

Phytozome

Locus Genomic View Functional Annotation
Cre12.g519000.t1.1 Cre12.g519000.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ASB2, PAI1 g12795.t1 JGI285072 30791913 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0087
motif_0087_1

motif_0087_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
22
Motif Bicluster: 
bicluster_0087
Width: 
24
Number of Sites: 
1
Consensus: 
CCttCaCctCCGCCgCCtCCgCct
motif_0087_2

motif_0087_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2700
Motif Bicluster: 
bicluster_0087
Width: 
15
Number of Sites: 
1
Consensus: 
GCAGCAGCAGCAGcA
 0.12
bicluster_0149
motif_0149_1

motif_0149_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.28
Motif Bicluster: 
bicluster_0149
Width: 
20
Number of Sites: 
1
Consensus: 
AcAAtTATgcaAgtatGGaa
motif_0149_2

motif_0149_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000025
Motif Bicluster: 
bicluster_0149
Width: 
24
Number of Sites: 
1
Consensus: 
AgcAgcaGgnggGgCaGGaGCtGg
 0.23

GO Terms

GO:0004640 GO:0006568 -

phosphoribosylanthranilate isomerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.

tryptophan metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI285072

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