Cre12.g524300.t1.2 Tetratricopeptide repeat (TPR)-like superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g524300.t1.2 chromosome_12 Tetratricopeptide repeat (TPR)-like superfamily protein CDS 4797936 4801456 + 3 520

Phytozome

Locus Genomic View Functional Annotation
Cre12.g524300.t1.2 Cre12.g524300.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12909.t1, Cre12.g524300.t1.1 JGI184916 30792635 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0072
motif_0072_1

motif_0072_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0072
Width: 
24
Number of Sites: 
1
Consensus: 
GcGGAGGcGGaGGtgGAGGcgGcG
motif_0072_2

motif_0072_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.4
Motif Bicluster: 
bicluster_0072
Width: 
22
Number of Sites: 
1
Consensus: 
gCCtcCaCCcTCtnCaCCAcCa
 0.14
bicluster_0174
motif_0174_1

motif_0174_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0174
Width: 
19
Number of Sites: 
1
Consensus: 
TGtTGGTGTggGTGAtGaa
motif_0174_2

motif_0174_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
52
Motif Bicluster: 
bicluster_0174
Width: 
24
Number of Sites: 
1
Consensus: 
TtTtgcaTgtgTacATaAAGaAaA
 0.17

GO Terms

GO:0005515 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI184916

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