Cre12.g528000.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g528000.t1.2 chromosome_12 CDS 5215068 5218816 - 3 748

Phytozome

Locus Genomic View Functional Annotation
Cre12.g528000.t1.2 Cre12.g528000.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g13004.t1, Cre12.g528000.t1.1 JGI184895 30793504 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0023
motif_0023_1

motif_0023_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000034
Motif Bicluster: 
bicluster_0023
Width: 
21
Number of Sites: 
1
Consensus: 
gAGCTgcgGaAGgAGCAGcAG
motif_0023_2

motif_0023_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000021
Motif Bicluster: 
bicluster_0023
Width: 
24
Number of Sites: 
1
Consensus: 
TaTcTTaAtgtcTccaGAnantAA
 0.10
bicluster_0171
motif_0171_1

motif_0171_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1500
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
CAnACTtgTAnTtcAaTnAAT
motif_0171_2

motif_0171_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
aGAgAAcAaaAtctAAgngAA
 0.17

GO Terms

GO:0030554 -

adenyl nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with adenyl nucleotides, any compound consisting of adenosine esterified with (ortho)phosphate.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI184895

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