Cre12.g530600.t1.1 glutamine synthetase 1;4

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g530600.t1.1 chromosome_12 glutamine synthetase 1;4 CDS 5458758 5461595 - 2 837

Phytozome

Locus Genomic View Functional Annotation
Cre12.g530600.t1.1 Cre12.g530600.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GLN3 g13060.t1 JGI136895 30793047 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0164
motif_0164_1

motif_0164_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0012
Motif Bicluster: 
bicluster_0164
Width: 
20
Number of Sites: 
1
Consensus: 
aTAAatATGnaatTcAttAA
motif_0164_2

motif_0164_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0164
Width: 
24
Number of Sites: 
1
Consensus: 
AgttctcTcTTtTcATctngaTta
 0.14
bicluster_0184
motif_0184_1

motif_0184_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000032
Motif Bicluster: 
bicluster_0184
Width: 
21
Number of Sites: 
1
Consensus: 
TgaactattcaTgaATGTaat
motif_0184_2

motif_0184_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.45
Motif Bicluster: 
bicluster_0184
Width: 
21
Number of Sites: 
1
Consensus: 
ATAAAtATgtAagTcATgaAa
 0.14

GO Terms

GO:0004356 GO:0006807 GO:0006542 -

glutamate-ammonia ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: L-glutamate + ATP + NH(4)(+) = L-glutamine + ADP + 2 H(+) + phosphate.

nitrogen compound metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.

glutamine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI136895

Add comment

Log in to post comments