Cre12.g534100.t1.1 B-box type zinc finger protein with CCT domain

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g534100.t1.1 chromosome_12 B-box type zinc finger protein with CCT domain CDS 5906468 5911401 - 4 933

Phytozome

Locus Genomic View Functional Annotation
Cre12.g534100.t1.1 Cre12.g534100.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
COL, CON2 g13136.t1 Not available 30792413 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0112
motif_0112_1

motif_0112_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.6e-25
Motif Bicluster: 
bicluster_0112
Width: 
24
Number of Sites: 
1
Consensus: 
GCAGcgGCAGtgGCAGcnGCgGca
motif_0112_2

motif_0112_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000016
Motif Bicluster: 
bicluster_0112
Width: 
24
Number of Sites: 
1
Consensus: 
gTgcGTGcgTGTGTGTgTgtGTGt
 0.22
bicluster_0147
motif_0147_1

motif_0147_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-19
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
TGCgTgTgtGtgTGTgTgTGTgtG
motif_0147_2

motif_0147_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000042
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
GGtGGcGGtGGcGGtGGCGGtGGc
 0.18

GO Terms

GO:0005515 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

Add comment

Log in to post comments