Cre12.g540250.t1.2 Selenoprotein W1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g540250.t1.2 chromosome_12 Selenoprotein W1 CDS 9376115 9377660 - 1 545

Phytozome

Locus Genomic View Functional Annotation
Cre12.g540250.t1.2 Cre12.g540250.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SELW1 g13771.t1, Cre12.g540250.t1.1 JGI314887 30793626 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0002
motif_0002_1

motif_0002_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.9e-22
Motif Bicluster: 
bicluster_0002
Width: 
21
Number of Sites: 
1
Consensus: 
GtGTGtGTGngTGcaTGtGng
motif_0002_2

motif_0002_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0002
Width: 
0
Number of Sites: 
1
 0.54
bicluster_0176
motif_0176_1

motif_0176_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000064
Motif Bicluster: 
bicluster_0176
Width: 
21
Number of Sites: 
1
Consensus: 
CAGCACCAgCagCAgcagCAc
motif_0176_2

motif_0176_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000039
Motif Bicluster: 
bicluster_0176
Width: 
15
Number of Sites: 
1
Consensus: 
tGGcgGtGGcGGCaG
 0.39

GO Terms

GO:0008430 GO:0045454 -

selenium binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with selenium (Se).

cell redox homeostasis

GO Category: 
biological_process
Details: 
Any process that maintains the redox environment of a cell or compartment within a cell.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI314887

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