Cre12.g544150.t1.2 cyclophilin 20-2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g544150.t1.2 chromosome_12 cyclophilin 20-2 CDS 8924647 8927568 - 2 921

Phytozome

Locus Genomic View Functional Annotation
Cre12.g544150.t1.2 Cre12.g544150.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CYN7, NSG1 g13679.t1, Cre12.g544150.t1.1 JGI184047 30791953 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0028
motif_0028_1

motif_0028_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000028
Motif Bicluster: 
bicluster_0028
Width: 
24
Number of Sites: 
1
Consensus: 
ATAccagcCCAAaCtAAAcCgAAc
motif_0028_2

motif_0028_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000067
Motif Bicluster: 
bicluster_0028
Width: 
24
Number of Sites: 
1
Consensus: 
cCAncagCACCagCAgcAgCagCA
 0.12
bicluster_0185
motif_0185_1

motif_0185_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000027
Motif Bicluster: 
bicluster_0185
Width: 
21
Number of Sites: 
1
Consensus: 
GCGGCGGCggCagcGGCgGcg
motif_0185_2

motif_0185_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0185
Width: 
24
Number of Sites: 
1
Consensus: 
atTGCATtGgGntCgagttacTTg
 0.13

GO Terms

GO:0003755 GO:0006457 -

peptidyl-prolyl cis-trans isomerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

protein folding

GO Category: 
biological_process
Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI184047

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