Cre12.g545101.t1.1 xanthine dehydrogenase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g545101.t1.1 chromosome_12 xanthine dehydrogenase 1 CDS 8821284 8836535 + 15 251

Phytozome

Locus Genomic View Functional Annotation
Cre12.g545101.t1.1 Cre12.g545101.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
XDH1 g13658.t1 Not available 30791886 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0048
motif_0048_1

motif_0048_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-18
Motif Bicluster: 
bicluster_0048
Width: 
24
Number of Sites: 
1
Consensus: 
GCAGgnGCAgcaGcAGCAGCaGCA
motif_0048_2

motif_0048_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000046
Motif Bicluster: 
bicluster_0048
Width: 
21
Number of Sites: 
1
Consensus: 
GntGGcGGCGgTGGcGGcGGC
 0.21
bicluster_0096
motif_0096_1

motif_0096_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00013
Motif Bicluster: 
bicluster_0096
Width: 
21
Number of Sites: 
1
Consensus: 
GAGGCGGaGgcGGaGGcGGAG
motif_0096_2

motif_0096_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.1
Motif Bicluster: 
bicluster_0096
Width: 
24
Number of Sites: 
1
Consensus: 
AtAGAAatgAAAGCgAGTGtGaAT
 0.21

GO Terms

GO:0009055 GO:0051536 GO:0016491 GO:0055114 GO:0046872 -

electron carrier activity

GO Category: 
molecular_function
Details: 
Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system.

iron-sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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