Cre12.g547150.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g547150.t1.2 chromosome_12 CDS 8609618 8613219 + 3 601

Phytozome

Locus Genomic View Functional Annotation
Cre12.g547150.t1.2 Cre12.g547150.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g13610.t1, Cre12.g547150.t1.1 JGI426433 30792609 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0096
motif_0096_1

motif_0096_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00013
Motif Bicluster: 
bicluster_0096
Width: 
21
Number of Sites: 
1
Consensus: 
GAGGCGGaGgcGGaGGcGGAG
motif_0096_2

motif_0096_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.1
Motif Bicluster: 
bicluster_0096
Width: 
24
Number of Sites: 
1
Consensus: 
AtAGAAatgAAAGCgAGTGtGaAT
 0.21
bicluster_0103
motif_0103_1

motif_0103_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000058
Motif Bicluster: 
bicluster_0103
Width: 
24
Number of Sites: 
1
Consensus: 
GCaGCagCAgCAGCAcctgCAGCA
motif_0103_2

motif_0103_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.5
Motif Bicluster: 
bicluster_0103
Width: 
21
Number of Sites: 
1
Consensus: 
AAacncCAgtagtcTtnAaaA
 0.16

GO Terms

GO:0016813 GO:0005737 -

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI426433

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